sporePrint
Sovereign Scientific Computing — 11 Gates, 519 GB Science Data, Full Provenance
11 gates online. 13 primals. 135K+ tests. 13/13 GREEN. 519 GB across 17 domains.
biomeOS v4.57 — cell attach SHIPPED. ironGate Phase 1 UNBLOCKED. nestgate.io LIVE.
Find Your Path
Not sure where to start? Pick what matters to you.
The Ecosystem
Four organizations, each with a distinct role. Primals build capabilities. Springs validate the science. Products compose them into tools people use. Protists evolve toward wider-world usability.
Explore
ecoPrimals is running. Three gates operate the full 13-primal NUCLEUS composition with Provenance 7/7 validated on Linux and Windows. Self-hosted scientific computing in pure Rust — GPU-accelerated bioinformatics, lattice QCD, pharmacometrics, and more, on commodity hardware without CUDA or cloud dependencies.
Try It
In 5 minutes, you can verify core claims on this site:
# Build from source (requires Rust — 2 minute install)
curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh
git clone https://github.com/syntheticChemistry/groundSpring && cd groundSpring
cargo test --workspace # all tests pass, 0 failures
cargo run --release --bin validate # exit 0 = pass
cargo deny check # zero license violations, zero C dependencies
# Or: pre-built binaries from the depot (no Rust required)
# See https://sporeprint.primals.eco/lab/getting-started-plasmidbin/ for full instructions
# Binaries are musl-static, BLAKE3-verified, zero runtime dependencies
If those commands run, the claims are verified. No institutional access. No proprietary software. No cloud.
- 🧬 Run real scientific pipelines locally — genomics, protein structure, lattice QCD, pharmacometrics, precision agriculture
- 📄 Reproduce published results — 175+ papers across 9 springs, each as a binary you can run
- ⚡ Use any GPU — NVIDIA, AMD, Intel — no CUDA lock-in, no vendor toolchain
- 🔒 Own your data and compute — nothing leaves your machine
- ✅ Validate with guideStone — self-verifying build artifacts that prove their own correctness
Key evidence pages:
- GPU-accelerated DADA2 benchmark — Rust vs Python head-to-head on 16S rRNA pipeline
- Self-hosted 16S bioinformatics — 235+ validation checks, real NCBI data
- Cross-vendor f64 GPU computing — WGSL shaders on NVIDIA, AMD, Intel without CUDA
- Lattice QCD on consumer GPUs — gauge theory without CUDA, 59/59 checks
- Self-hosted distributed compute mesh — multi-gate topology, LAN-aware routing
- Reproducible self-verifying software — guideStone verification class
New here? Get Started — deploy NUCLEUS on your own hardware. Or skip straight to plasmidBin — pre-built binaries, BLAKE3 verified, running in 5 minutes.
Why “sporePrint”
A spore print is how mycologists identify species they have never seen before. You press the cap to paper and leave it overnight. In the morning: the permanent record of what the organism is, what it can produce, and how to grow it yourself.
This site is the spore print for ecoPrimals. The permanent, public, verifiable impression of a self-hosted, cloud-independent scientific computing ecosystem. Clone it. Run it. Verify it. Grow from it.
What This Is (In Standard Terms)
ecoPrimals produces self-contained scientific computations that reproduce published results on owned commodity hardware and carry their validation and provenance with them. The platform is written entirely in Rust and provides a vendor-agnostic, locally executable, cryptographically verifiable alternative to the conventional stack.
| Conventional tool | ecoPrimals equivalent |
|---|---|
| CUDA GPU compute | barraCuda — WGSL/WebGPU compute shaders, f64 precision, any GPU with Vulkan |
| Galaxy/QIIME2 bioinformatics | wetSpring — GPU-accelerated 16S pipeline, DADA2, phylogenetics, PFAS |
| Cloud AlphaFold | helixVision — coralForge AlphaFold2/3 in pure Rust, local GPU |
| GROMACS / MD engines | hotSpring — SU(3) gauge theory, Sarkas Yukawa MD, nuclear EOS |
| NONMEM / Monolix PK-PD | healthSpring — clinical simulation, toxicology, biosignal analysis |
| Cloud remote sensing | airSpring — FAO-56 ET, soil moisture, crop modeling |
| Vendor GPU SDKs | toadStool — unified Vulkan/WebGPU dispatch, multi-vendor GPU management |
| VPN / service mesh | songBird — JSON-RPC 2.0 capability routing, multi-node federation |
| Cloud object storage | NestGate — BLAKE3-hashed CAS with provenance chains |
| Package managers | plasmidBin — musl-static binaries, BLAKE3 verified, zero runtime deps |
All components are pure Rust, statically linked (musl), and licensed AGPL-3.0. Unsafe code is forbidden by default (#![forbid(unsafe_code)]) and isolated to narrowly scoped, safety-documented hardware-containment crates where required (e.g., toadStool GPU/NPU dispatch). The system runs on consumer hardware with any GPU exposing Vulkan drivers (tested: NVIDIA, AMD, Intel).